Resources

My Github:

https://github.com/chichaumiau/

RNA-Puzzles:

A CASP-like blind assessment of RNA 3D structure prediction

http://ahsoka.u-strasbg.fr/rnapuzzles/

RBscore:

A general probability score for predicting nucleic acid binding sites on protein based on 3D structure

http://ahsoka.u-strasbg.fr/rbscore/

NBench:

A large-scale benchmark of nucleic acid binding site prediction programs and web servers

http://ahsoka.u-strasbg.fr/nbench/

Side-chain Packing Programs:

RASP (RApid Side-chain Predictor)

http://chichaumiau.ixiezi.com/2013/01/07/rasp-version-1-80/

https://sourceforge.net/projects/raspv180/

CIS-RR (Clash-detection guided Iterative Search algorithm with Rotamer Relaxation)

http://159.226.118.51/lims/cisrr/cisrr.html

RASP tools (Simple tools for protein side-chain structure assessment)

http://chichaumiau.ixiezi.com/2013/01/07/rasp-tools-v1-0-available/

============================================ ============================================

Protein structure prediction web server

jFR (Fold Recognition/Threading)

http://159.226.118.51:8081/#

jFR apk client for android

http://sourceforge.net/projects/apkclientforjfr/

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